Single-cell sequencing Onco-Immunology:

Ponzetta A, Carriero R, Carnevale S, Barbagallo M, Molgora M, Perucchini C, Magrini E, Gianni F, Kunderfranco P, Polentarutti N, Pasqualini F, Di Marco S, Supino D, Peano C, Cananzi F, Colombo P, Pilotti S, Alomar SY, Bonavita E, Galdiero MR, Garlanda C, Mantovani A, Jaillon S. Neutrophils Driving Unconventional T Cells Mediate Resistance against Murine Sarcomas and Selected Human Tumors. Cell. 2019 Jun 22. pii: S0092-8674(19)30618-X. doi: 10.1016/j.cell.2019.05.047. PubMed PMID: 31257026. Journal 5-year impact factor: 36.216


Romano O and Peano C, et al.. Transcriptional, epigenetic and retroviral signatures identify regulatory regions involved in hematopoietic lineage commitment. Scientific Reports. 2016 Apr 20;6:24724. doi: 10.1038/srep24724. PubMed PMID: 27095295; PubMed Central PMCID: PMC4837375. Journal 5-year impact factor: 4.609

Cavazza A, et al.. Dynamic Transcriptional and Epigenetic Regulation of Human Epidermal Keratinocyte Differentiation. Stem Cell Reports. 2016 Mar 23. pii: S2213-6711(16)00084-9. doi: 10.1016/j.stemcr. 2016.03.003. Journal 5-year impact factor: 7.181

Peano C, et al. Characterization of the Escherichia coli σ(S) core regulon by Chromatin Immunoprecipitation-sequencing (ChIP-seq) analysis. Scientific Reports 2015 May 28;5:10469. doi: 10.1038/srep10469. PubMed PMID: 26020590. Journal 5-year impact factor: 4.609

Maciag A and Peano C, et al. In vitro transcription profiling of the σS subunit of bacterial RNA polymerase: re-definition of the σS regulon and identification of σS-specific promoter sequence elements. Nucleic Acids Research 2011 Jul;39(13):5338-55. doi: 10.1093/nar/gkr129. Epub 2011 Mar 11. PubMed PMID: 21398637; PubMed Central PMCID: PMC3141248. Journal 5-year impact factor: 10.235


Bongiovanni D, Santamaria G, Klug M, Santovito D, Felicetta A, Hristov M, von Scheidt M, Aslani M, Cibella J, Weber C, Moretti A, Laugwitz KL, Peano C, Bernlochner I. Transcriptome Analysis of Reticulated Platelets Reveals a Prothrombotic Profile. Thromb Haemost. 2019 Sep 1. doi: 10.1055/s-0039-1695009. impact factor: 4.73

Talà A, et al. Pirin: A novel redox-sensitive modulator of primary and secondary metabolism in Streptomyces. Metabolic Engineering 2018 Jul;48:254-268. doi: 10.1016/j.ymben.2018.06.008. Epub 2018 Jun 23. PubMed PMID: 29944936. 5-year impact factor: 7.418

Turroni S, et al. Temporal dynamics of the gut microbiota in people sharing a confined environment, the longest ground-based space simulation ever, MARS500. Microbiome. 2017 Mar 24;5(1):39. doi: 10.1186/s40168-017-0256-8. PubMed PMID: 28340597. Journal 5-year impact factor: 10.903

Rampelli S, et al. Metagenome Sequencing of the Hadza Hunter-Gatherer Gut Microbiota. Current Biology 2015 Current Biology 2015 Jun 29;25(13):1682-93. doi: 10.1016/j.cub.2015.04.055. PubMed PMID: 25981789. Journal 5-year impact factor: 9.972

Peano C, et al.. Comparative genomics revealed key molecular targets to rapidly convert a reference rifamycin-producing bacterial strain into an overproducer by genetic engineering. Metabolic Engineering 2014 Aug 19;26C:1-16. doi: 10.1016/j.ymben.2014.08.001. Journal 5-year impact factor: 7.418

Schnorr SL, et al. Gut microbiome of the Hadza hunter-gatherers. Nature Communications 2014 Apr 15;5:3654. doi: 10.1038/ncomms4654. PubMed PMID: 24736369; PubMed Central PMCID: PMC3996546. Journal 5-year impact factor: 13.691

Consolandi C, et al. Behçet’s syndrome patients exhibit specific microbiome signature. Autoimmunity Reviews 2014 Nov 27. pii: S1568-9972(14)00281-X. doi: 10.1016/j.autrev.2014.11.009. Review. PubMed PMID: 25435420. Journal 5-year impact factor: 8.745

Tomato Genome Consortium. The tomato genome sequence provides insights into fleshy fruit evolution. Nature. 2012 May 30;485(7400):635-41. doi: 10.1038/nature11119. PubMed PMID: 22660326; PubMed Central PMCID: PMC3378239. Journal 5-year impact factor: 51.941

Host-pathogens interaction:

Majlessi L, et al. Colonization with Helicobacter is concomitant with modified gut microbiota and drastic failure of the immune control of Mycobacterium tuberculosis. Mucosal Immunology 2017 Feb 1. doi: 10.1038/mi.2016.140. PubMed PMID: 28145441. Journal 5-year impact factor: 7.360

Del Bel Belluz L, et al. The Typhoid Toxin Promotes Host Survival and the Establishment of a Persistent Asymptomatic Infection. PLoS Pathogens. 2016 Apr 7;12(4):e1005528. doi: 10.1371/journal.ppat.1005528. Journal 5-year impact factor: 6.158


Puccio S, Grillo G, Licciulli F, Severgnini M, Liuni S, Bicciato S, De Bellis  G, Ferrari F, Peano C. WoPPER: Web server for Position Related data analysis of
gene Expression in Prokaryotes. Nucleic Acids Res. 2017 Jul 3;45(W1):W109-W115. doi: 10.1093/nar/gkx329. PubMed PMID: 28460063; PubMed Central PMCID: PMC5570229.Journal 5-year impact factor: 10.235

Bicciato S, et al. A computational procedure to identify significant overlap of differentially expressed and genomic imbalanced regions in cancer datasets. Nucleic Acids Research 2009 Aug;37(15):5057-70. doi: 10.1093/nar/gkp520. Epub 2009 Jun 19. PubMed PMID: 19542187; PubMed Central PMCID: PMC2731905. Journal 5-year impact factor: 10.235